Synthesis and evaluation of novel photoreactive alpha-amino acid analog carrying acidic and cleavable functions

Bioorg Med Chem Lett. 2009 Jan 1;19(1):80-2. doi: 10.1016/j.bmcl.2008.11.013. Epub 2008 Nov 8.

Abstract

A novel photoreactive alpha-amino acid bearing an acidic residue and a cleavable diazirine was developed. To mimic common acidic alpha-amino acids, the residue was designed to be N-acylsulfonamide that possesses an acidic proton and is able to dissociate under the physiological conditions. The inhibition assay of its biotin-tagged derivative with glutamyl endopeptidase from Staphylococcus aureus V8 strain revealed a Ki(app) value of 162 microM, which is slightly higher than the K(m) value of a common substrate. Upon UV irradiation, this derivative specifically photolabeled glutamyl endopeptidase, L-glutamate dehydrogenase, glutamic oxalacetic transaminase, and L-glutamine synthetase, all the enzymes exhibit high affinity toward acidic alpha-amino acids. In addition, N-acylsulfonamide group functioned as a cleavable linker in mild basic solution after a brief N-alkylation. Either the multifunctional nature or the simple structure of this acidic alpha-amino acid surrogate would be useful as versatile photoreactive building block.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids / chemistry*
  • Amino Acids / radiation effects
  • Biotinylation
  • Photochemistry / methods*
  • Protease Inhibitors / chemical synthesis*
  • Protease Inhibitors / pharmacology
  • Serine Endopeptidases / drug effects*
  • Staphylococcus aureus / enzymology
  • Sulfonamides / chemical synthesis
  • Sulfonamides / pharmacology
  • Ultraviolet Rays

Substances

  • Amino Acids
  • Protease Inhibitors
  • Sulfonamides
  • Serine Endopeptidases
  • glutamyl endopeptidase